CDS

Accession Number TCMCG006C46047
gbkey CDS
Protein Id XP_013736946.1
Location complement(join(79057..79101,79218..79391,79660..79800,80173..80280,80437..80563,80659..80727,80826..80934,81264..81392,81484..81790,81867..81935,82217..82575,82697..82773,83008..83195,83311..83585,83673..83835,83956..84521,84608..84794,84904..85086,85207..85324,85730..85827,85920..86027,86127..86212,86290..86447,86556..86866,86939..87265))
Gene LOC106439936
GeneID 106439936
Organism Brassica napus

Protein

Length 1493aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013881492.2
Definition nuclear pore complex protein NUP160-like isoform X1 [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category UY
Description Nuclear pore complex protein NUP160
KEGG_TC 1.I.1
KEGG_Module M00427        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K14303        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03013        [VIEW IN KEGG]
map03013        [VIEW IN KEGG]
GOs GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005635        [VIEW IN EMBL-EBI]
GO:0005643        [VIEW IN EMBL-EBI]
GO:0006403        [VIEW IN EMBL-EBI]
GO:0006405        [VIEW IN EMBL-EBI]
GO:0006406        [VIEW IN EMBL-EBI]
GO:0006611        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0006913        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009266        [VIEW IN EMBL-EBI]
GO:0009409        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009733        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0015931        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016973        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0031503        [VIEW IN EMBL-EBI]
GO:0031965        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0050657        [VIEW IN EMBL-EBI]
GO:0050658        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051028        [VIEW IN EMBL-EBI]
GO:0051168        [VIEW IN EMBL-EBI]
GO:0051169        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051236        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0071166        [VIEW IN EMBL-EBI]
GO:0071426        [VIEW IN EMBL-EBI]
GO:0071427        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAGAGGAATCGTCTGAGTTCGTCTGCCGGTATGGAGGTTCCAGTCGCAGGCGGCGGAAATGTTGTCAAATGGGTCGATATATCAGTCTCTGCTCCTCCTTCTCCGGAGAATGGATGTGTTCTCCTTCCTTGGTCGGAAGAAGACTACGCTTCGAGCTGTGTAATTGGCGAACCTCCGATCTCTTTCGTTTGGAGAATCAACAAAACGAGCTCAAACGTTCTCGAGCTTCTTCAGCTCTCTTCTGAATCTGGGTTTCCTTTAACTGGGCTTCGCTTCGTCTTCGCTCATACCCTCTCCCCTTTCGCTTTTCTATTCGCCGACGAGGGTAATGATCTCGTCTTCTTTCTTTACGCTCTCACGCCCTCTGGTGTTGTCTACCTCCTTAAACTCGATAATACTTCAGCTTATAAGTCCGGCTCAGTCTTCCCGCTTGACCATCTGACCCACTTGGATGTTCGACCTTACTTGAACGAAACTCATGTTACTAGTGTGGCTGCATCGCCTGGGTTCCTTTTCCTTGGGAGGTCTGATGGCTGTGTCTCTTGCTTCCAGCCTCAGAGACCACCAGGTGGATTAACTTTCCACCAGGAGCTACGTGATGATACAGGACTTGGTCGTCTTTGGGGTTTTGTAAGGGGGACAGTTGTTGCAGCTGTGCAAGATTTGTTTATATCAGAAGTTTATGGAAGATATTTGATATGCGTGCTTCATGCCGATGGGGCCTTACGTGTCTGGGACATTTTTACCTGTAGCAGGGTTTTGTGTCAGAGTATAGCTGCTAAAAACGTTGAGGGGGTTATGTGTCTGAGGTTATGGTTGGGCAAACCTGATTACGATTCTGGCATCATTCCTTTAGCTCTCTTGTATAGAAATACAATGGATGTCAACGTGGTGGACGTGATCACTGTATATGGCCTGCACTTTAGTTCTGGGGAGGGGATAGCCTTGTCTCTGGATTCTGGACTACAGAATATTTCACTGGAAGGGGGGGAATTGTGTGATGTCAGATTTACATCCGACAAGATCTGGACTCTGAAGGCTGATGAATTGGCATCTCACATGTTGTACCACAAATCTAGCACCATGGAAGCACGGTCTTACACTTTACAGGAGGAATACATTTCTGAGCAGTTATTTCTGAGTGCTAGGAGCTCTTCGCATGACCTTCTTTTGACTTCACATTCACTATTTTCATCCGCGAAGGATCAAATTATGGGATTCATTTCATCAATCTTCGTACGTAGGCTTCTTTGTCCTGGAATTTATCACAATGTTTCCTTGCGTCTAACTTTACGGGACCACAACAAACACTGGACTGATTCTGAATTTCAATCCTTAAGTCTTGATGAGCTTAAAAGCGAGATTCTTTTACTAGTTGAGCAAGAGGTTACTGGTGAGACTTCTATTTCAGTTTTTCACTGGTGGGAAAACTTTTGTTCGTGCTATCTTGATCACTGGTGCAACAATAATGAACCTTGCACGTTGCTGGTTCAGTCAGATGTTATTGGTTTAGTTAGAAACAATTCTGTATCACTGTTCTCTAGATTAGAGAACGTTGAGCACAGCCTTGGAGGATCTTCCTCCAAACACAGCAGCCTGACGAACTTAGGCTTGGGAATGTCTATCAATGAACATGAGATTCTGTCGGAGGTACTAAGATGTACTTTGAAGATCAATAAGCAGTGGGGTGCTGCTCCTTATGCCATGTATTATGAATCGGTTACTGGAAGGCCAGTTATCTCATCCGAGGAAATTGTTCCTCGCTTAGTTAACATCCTTGAGTCGGGATATGCGATGTCCATAGGTCAGCGTACTTGGTCGGATCTTGGTACTGATAGAGCATGGGAAAAAGAGCTGGAAGCTCAAAAAAATCTTAGGACATTTTCCATTGAAATGTTATTGTCTCTCTCTGCTCTATGTCAAAGGGCTGGATCTTGGGGAAAGGTTTTTACTATCATGGAGCACTATTTGCAGTATCTGGTCCCTAAGAAAGTTATGCATAACAATGTTGGCGAGACATTATCTGATATCTGTTGTTCTATCCTCGTTCAAGCGACTTCTCAGTTTGCACAGGTGATGTTTGAGTCTGCCTTTGACATCTTCCTACTCGTCAGCTATCTGCTTAACATCTCTGGGCAGGTAAATATGTCACAGCAAGACATATGTAAGCTACGGCTTGAATTGCTTCCGATGATCCAAGATATTGTCTCAGAGTGGCTCATCGTTCTTTTCTTTGTTACCACGCCGGCTCAATTGACTTCAATGGATGATTTCAGCTCTAAGCTCTCATCTCTACAGATTGATAGCAGCATTGACAAAAGATCATGGAACACAATGCTTGGGAAATGCGGTTTCTCATTGGCGTATATTCTTCTTTTCAGTGACCGAAGTTGCATTGTGGATAGCCGATTTAACTTAAGATATCTTCCAAGTTCACAAATCATTACAAGCTTGGTTCAAAACTTTATCAGCTGGATTCGTTATAGTAAAACAGGAGAAGACGCTTCTTCTTTGCTAAGACGCTCAACTGAGCTTACTCTTAGGTTGATCAGGAATGGACAGGCTGATGCGGTTGAGCGAATCCTCTTGGTTGTGGAGGCAAGTTTACGTGGGGAGAAAACATTTGGACATGCCCAAGATACCAACGGAGATTGGTGTCTTCTTCAACATCTCCGTGGTTGTTGCCTCCTTGATCAAGTACAACGTGGAGCATGCGGGATATCAAGAGAGAGGAAGATTAGTGATTCCATCCGCTGCTTCTTCAGAGCTTCATCAGGTGAAGGATCTTGGAAGGCTTTGCACAGTTTGGCTAAAGAAGCAGGATTTTCACATTCCACAATTGGTGCCAGTATTTCAGATGGTGAAAAGTCTTGTGCAACATGGAAACTTCATTACTATGAATGGGCTATGCAAATTTTTGAACGGTATAATATAAGTGAAGGAGCTTGTCAGTTTGCGTATGCAGCCCTTGAGCAAGTAGACGAGGCCATTAATTTCATGGAGAGTAGCGAGAACGTCCATCCACCTGTAACAGCCACTTACTGTAGAGGACGACTGTGGGCAAATGTTTTCAAGTTCACGTTAGATCTGAATCTCTTGAATGATGCTTACTGCGCTATTATTTCAAACCCTGATGAGGAAATTAAGCGCATCTGTTTGAGGCGCTTCATCATAGTTCTATTTGAATGTGGCAAAACCAAGATCCTCAGTGAGGGACATTTGCCTTTCATCGGCTTATCGGATAAGATCACCCAAGAGCTCTTTTGGAAGGCTGGGCGGTCTGAGATAATGATAAAGCCAAATCCATACAAGCTGCTTTATGCTTACGAGATGAGACGACACAATTGGCGAATGGCGGCAAGTTACATGTATCAGTTTTCTGCTCGTCTGAGAAGTGAGGCAACATCCACGGATTATAAACACAAGTCCCTAGTTTTGCAAGAGAGGCTAAATGGACTTTCTGCTGCTATAAATGCATTAAGTCTTGTGCATCCTGGGCATGCTTGGATTGATCCACTACCAGAAGAATCCATGCATTATCCAGCAAAAAAGGCTAAAAGAGTAGAAGAACAACAATCAGTAAGGAGTAGTGACCAGCCAAAAGGGTATCAGAGTTGCATTGATATCGAAAAAATCCAAAACGAGTATGTTTTCACCACAGCAGAATATTTGCTTTCTCTGAAAAACTTTGAGTGGACATATTCAGCGCTCGAAAAGCCACCACCGGACTTGGTTGACCTTCTTGTTCAGGCAGACTTGTATGACATGGCATTCACTGTTGTTTTAAAATTTTGGAGAGGCTCAGCTTTGAAAAGGGAGCTGGAAAAGATATTTGAGAATATGACAATTAGATGTTGCCCTGCTAAAGGAACGTTGTGGTCATCAAATGATCTCAGGCCTAATCTTTTGCTAACATCTACGGAAGACGAAGTCACTCATTCGCCTGAGAGAAGCCCTGCTGCTCAAAGCTCCAACTTGGCTGGTGACTGGGAAATTCTTGAGGTTTATCTTAAGAGGTACAAAGATATACACGCTAGATTGCCAGTTACTGTTGCTTCAACCCTTCTTCAGGCAGATTCTTGTATCGAATTGCCTCTTTGGCTGGTTCACATGTTCAAGGACGGCAAGAAGGAGAAAGCTTTGGGAATGGGTGGGCAAGAAGCAAGTCCTGCTTCCTTGTTTCAGTTATATGTTGACTATGGGCGTCTTACAGAGGCCACTAATTTGCTATTGGAGTACATGGAATCATTTGCATCATCAAAACCAGCAGAGGTATTGAAAAGGAAAAAGGTATCAGGGGTTTGGTTCCCTTACACAACAGTGGAAAGACTATGGTGGGCGCTAGAGAAAACGATGAACTCAGGACGGATGTTGGAGCAGTGCCAGAAGCTTAAGGGACAACTCCAACAAGCGTTACTCAATCACTTAAAGCTGCTGAAGGTGGACTCGGATGATGCTGTGTCGTCTGCAACAGGCTGA
Protein:  
MERNRLSSSAGMEVPVAGGGNVVKWVDISVSAPPSPENGCVLLPWSEEDYASSCVIGEPPISFVWRINKTSSNVLELLQLSSESGFPLTGLRFVFAHTLSPFAFLFADEGNDLVFFLYALTPSGVVYLLKLDNTSAYKSGSVFPLDHLTHLDVRPYLNETHVTSVAASPGFLFLGRSDGCVSCFQPQRPPGGLTFHQELRDDTGLGRLWGFVRGTVVAAVQDLFISEVYGRYLICVLHADGALRVWDIFTCSRVLCQSIAAKNVEGVMCLRLWLGKPDYDSGIIPLALLYRNTMDVNVVDVITVYGLHFSSGEGIALSLDSGLQNISLEGGELCDVRFTSDKIWTLKADELASHMLYHKSSTMEARSYTLQEEYISEQLFLSARSSSHDLLLTSHSLFSSAKDQIMGFISSIFVRRLLCPGIYHNVSLRLTLRDHNKHWTDSEFQSLSLDELKSEILLLVEQEVTGETSISVFHWWENFCSCYLDHWCNNNEPCTLLVQSDVIGLVRNNSVSLFSRLENVEHSLGGSSSKHSSLTNLGLGMSINEHEILSEVLRCTLKINKQWGAAPYAMYYESVTGRPVISSEEIVPRLVNILESGYAMSIGQRTWSDLGTDRAWEKELEAQKNLRTFSIEMLLSLSALCQRAGSWGKVFTIMEHYLQYLVPKKVMHNNVGETLSDICCSILVQATSQFAQVMFESAFDIFLLVSYLLNISGQVNMSQQDICKLRLELLPMIQDIVSEWLIVLFFVTTPAQLTSMDDFSSKLSSLQIDSSIDKRSWNTMLGKCGFSLAYILLFSDRSCIVDSRFNLRYLPSSQIITSLVQNFISWIRYSKTGEDASSLLRRSTELTLRLIRNGQADAVERILLVVEASLRGEKTFGHAQDTNGDWCLLQHLRGCCLLDQVQRGACGISRERKISDSIRCFFRASSGEGSWKALHSLAKEAGFSHSTIGASISDGEKSCATWKLHYYEWAMQIFERYNISEGACQFAYAALEQVDEAINFMESSENVHPPVTATYCRGRLWANVFKFTLDLNLLNDAYCAIISNPDEEIKRICLRRFIIVLFECGKTKILSEGHLPFIGLSDKITQELFWKAGRSEIMIKPNPYKLLYAYEMRRHNWRMAASYMYQFSARLRSEATSTDYKHKSLVLQERLNGLSAAINALSLVHPGHAWIDPLPEESMHYPAKKAKRVEEQQSVRSSDQPKGYQSCIDIEKIQNEYVFTTAEYLLSLKNFEWTYSALEKPPPDLVDLLVQADLYDMAFTVVLKFWRGSALKRELEKIFENMTIRCCPAKGTLWSSNDLRPNLLLTSTEDEVTHSPERSPAAQSSNLAGDWEILEVYLKRYKDIHARLPVTVASTLLQADSCIELPLWLVHMFKDGKKEKALGMGGQEASPASLFQLYVDYGRLTEATNLLLEYMESFASSKPAEVLKRKKVSGVWFPYTTVERLWWALEKTMNSGRMLEQCQKLKGQLQQALLNHLKLLKVDSDDAVSSATG